Structural bioinformatics - analytical tools and services

Atomic Charge Calculator III

Atomic Charge Calculator III (ACC III) is an application for fast calculation of partial atomic charges. It features 20 empirical methods along with parameters from literature. Read more in NAR.


MOLEonline

MOLEonline web interface provides a direct access to MOLE functionality and enables on-line and easy-to-use interactive channel analysis. Read more in Bioinformatics.


ChannelsDB 2.0

ChannelsDB 2.0 is a comprehensive and regularly updated resource of channels, pores and tunnels found in biomacromolecules deposited in the Protein Data Bank and AlphaFill / AlphaFold databases. As such, it is a unique service for channel-related analyses. Read more in NAR.


αCharges

AlphaCharges (αCharges) is a web application for the calculation of partial atomic charges on protein structures predicted by the AlphaFold2 algorithm and deposited in the AlphaFoldDB database. Read more in NAR.

   


PDBCharges

PDBCharges is a web application providing partial atomic charges of protein structures from the Protein Data Bank. Read more in NAR.